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Public Health Dynamics Workshop (PHD 2018) Suggested Readings

(prior to workshop)

Burke DS and Grefenstette JJ. Toward an Integrated Meta-model of Public Health Dynamics for Preparedness Decision Support. J Public Health Manag Pract. 2013;19(0 2):S12-S15.
www.healthanalytics.net/HADM2016/ReadingMaterials-1.pdf

Epstein JM.  Why Model?  Journal of Artificial Societies and Social Simulation (JASSS-J Artif Soc S). 2008;11(4 12).
http://www.healthanalytics.net/HADM2016/ReadingMaterials-2.pdf

Grefenstette JJ, Brown ST, Rosenfeld R, Depasse J, Stone NT, Cooley PC, Wheaton WD, Fyshe A, Galloway DD, Sriram A, Guclu H, Abraham T, Burke DS. FRED (A Framework for Reconstructing Epidemic Dynamics): An open-source software system for modeling infectious diseases and control strategies using census-based populations. BMC Public Health, 2013 Oct;13(1), 940. doi: 10.1186/1471-2458-13-940. PubMed PMID: 24103508. Publication data.

Kumar S, Piper K, Galloway DD, Hadler JL, and Grefenstette JJ. Is population structure sufficient to generate area-level inequalities in influenza rates? An examination using agent-based models BMC Public Health, 2015 Sep 23;15(1):947. doi:10.1186/s12889-015-2284-2. PubMed PMID: 26400564. Publication data.

Liu F, Enanoria WT, Zipprich J, Blumberg S, Harriman K, Ackley SF, Wheaton WD, Allpress JL, Porco TC. The role of vaccination coverage, individual behaviors, and the public health response in the control of measles epidemics: an agent-based simulation for California. BMC Public Health. 2015 May 1;15(1):447. [Epub ahead of print] PubMed PMID: 25928152.

Lukens S, DePasse J, Rosenfeld R, Ghedin E, Mochan E, Brown ST, Grefenstette J, Burke DS, Swigon D, Clermont G. A large-scale immuno-epidemiological simulation of influenza A epidemics. BMC Public Health. 2014 Sep 29;14:1019. doi: 10.1186/1471-2458-14-1019. PubMed PMID: 25266818; PubMed Central PMCID: PMC4194421.

Kumar S, Grefenstette JJ, Galloway DD, Albert SM, and Burke DS. Policies to reduce influenza in the workplace: Impact assessments using an agent-based model. Am J Public Health, 2013 Aug;103(8):1406-11. doi: 10.2105/AJPH.2013.301269. Epub 2013 Jun 13. PubMed PMID: 23763426. Publication data.

Paparian J, Brown S, Burke D, Grefenstette J. "FRED Navigator: An interactive system for visualizing results from large-scale epidemic simulations," 2012 IEEE 8th International Conference on e-Science (e-Science 2012), pp.1-5, 8-12 Oct. 2012 doi: 10.1109/eScience.2012.6404444.

Brown ST, Tai JH, Bailey RR, Cooley PC, Wheaton WD, Potter MA, Voorhees RE, Lejeune M, Grefenstette JJ, Burke DS, McGlone SM, Lee BY. Would school closure for the 2009 H1N1 influenza epidemic have been worth the cost?: A computational simulation of Pennsylvania. BMC Public Health. BMC Public Health. 2011 May 20;11:353. doi: 10.1186/1471-2458-11-353. PubMed PMID: 21599920; PubMed Central PMCID: PMC3119163

Cooley P, Brown S, Cajka J, Chasteen B, Ganapathi L, Grefenstette J, Hollingsworth CR, Lee BY, Levine B, Wheaton WD, Wagener DK. The role of subway travel in an influenza epidemic: A New York City simulation. J Urban Health. 2011 Oct;88(5):982-95. PubMed PMID: 21826584; PubMed Central PMCID: PMC3191213.\

Ruberto I, Marques E, Burke DS, van Panhuis WG. The availability and consistency of dengue surveillance data provided online by the World Health Organization. PLoS Negl Trop Dis. 2015; 9(4):e0003511. DOI: 10.1371/journal.pntd.0003511.

Van Panhuis WG, Paul P, Emerson C, Grefenstette J, Wilder R, Herbst AJ, Heymann D, Burke DS. A systematic review of barriers to data sharing in public health. BMC Public Health. 2014;14:1144.

Van Panhuis WG, Grefenstette J, Jung SY, Chok NS, Cross A, Eng H, Lee BY, Zadorozhny V, Brown S, Cummings D, Burke DS. Contagious diseases in the United States from 1888 to the present. N Engl J Med. 2013;369:22.

Van Panhuis WG, Choisy M, Xiong X, Chok NS, Akarasewi P, Iamsirithaworn S, Lam SK, et al. Region-wide synchrony and traveling waves of dengue across eight countries in Southeast Asia. PNAS. 2015 Oct; 112(42):13069-13074. DOI: 10.1073/pnas.1501375112.

Click here for information on the Practicum Session on DAY 3. 

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Partial support provided by the Fogarty International Center, US NIH eCapacity grant R25 TW009717 “Empowering Indian Health Researchers with Computational Modeling Tools"

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